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clostridioides difficile infection

in review 4 min read Updated 2026-09-29
summary

C. difficile infection ≥3 unformed stools in 24 h + positive toxin test, usually within 8 weeks of antibiotics. Test only unformed stool. Stop the inciting antibiotic and PPI where possible. Oral vancomycin or fidaxomicin — never metronidazole first-line for inpatients, never IV vancomycin. Fulminant disease (shock, ileus, megacolon) → high-dose PO vancomycin + IV metronidazole + surgical consult. Recurrence (~25%) → fidaxomicin or vancomycin taper-pulse; FMT from the second recurrence.

plan

C. difficile infection initial bundle

  • contact precautions; soap-and-water hand hygiene (alcohol does not kill spores)
  • stop inciting antibiotics if possible; narrow any that must continue
  • stop PPI unless clear indication; avoid loperamide and opioids
  • first episode: vancomycin 125 mg PO QID × 10 days (or fidaxomicin 200 mg PO BID × 10 days)
  • fulminant (shock, ileus, megacolon): vancomycin 500 mg PO/NG QID + metronidazole 500 mg IV q8h; + rectal vancomycin if ileus
  • fulminant: general surgery + ID consult
  • no test of cure; do not retest within 7 days
local antibiogram

Formulary access, not resistance, drives CDI drug choice in Canada — check local fidaxomicin restrictions and oral vancomycin preparation.


diagnosis

  • test only if ≥3 unformed stools in 24 h without laxatives in the past 48 h
  • two-step testing (GDH or PCR, then toxin EIA) — PCR alone detects colonisation
    • PCR+/toxin− → likely colonisation; treat only if strong clinical suspicion
  • do not test formed stool, asymptomatic patients, or for test of cure
  • CT: colonic wall thickening, pericolonic stranding; plain film/CT for megacolon (>6 cm) or perforation

severity

categorycriteria (IDSA/SHEA)
non-severeWBC ≤15 × 10⁹/L and creatinine <133 µmol/L
severeWBC >15 × 10⁹/L or creatinine ≥133 µmol/L
fulminanthypotension/shock, ileus, or megacolon

treatment

first episode

agentdosenotes
fidaxomicin200 mg PO BID × 10 daysIDSA/SHEA 2021 preferred — lower recurrence (Louie (2011)); cost ~$2,500, restricted in many Canadian hospitals
vancomycin125 mg PO QID × 10 daysSunnybrook first-line for all inpatients; capsules not ODB-covered (EAP request) — oral solution compounded from IV vials is a cheaper route
metronidazole500 mg PO TID × 10 daysonly for non-severe outpatient disease when vancomycin/fidaxomicin unavailable

IV vancomycin does not reach the colon — never used for CDI.

fulminant

  • vancomycin 500 mg PO/NG QID
    • metronidazole 500 mg IV q8h
  • ileus → rectal vancomycin 500 mg in 100 mL saline q6h retention enema
  • early surgical consult: subtotal colectomy or diverting loop ileostomy with colonic lavage; lactate rising or WBC very high → do not delay

recurrence

Recurrence = symptoms returning within 8 weeks of completing therapy.

episodeoptions
first recurrencefidaxomicin 200 mg PO BID × 10 days, or extended-pulsed (BID × 5 days → alternate days to day 25) — EXTEND (2018); or vancomycin taper-pulse if vancomycin used initially
second or later recurrencefidaxomicin, vancomycin taper-pulse, or vancomycin 10 days → rifaximin 400 mg TID × 20 days; then FMT

Vancomycin taper-pulse: 125 mg QID × 14 days → BID × 7 days → daily × 7 days → every 2–3 days for 2–8 weeks.

  • bezlotoxumab (MODIFY (2017)) reduced recurrence but was discontinued by the manufacturer in January 2025
  • FMT after ≥2 recurrences; ID/GI referral

prevention

  • antimicrobial stewardship — the dominant modifiable risk
  • deprescribe PPIs
  • contact precautions until ≥48 h after diarrhoea resolves
  • secondary prophylaxis with oral vancomycin during future antibiotic courses: weak evidence; consider for patients with multiple prior recurrences (practice varies)
  • probiotics: not recommended by IDSA/SHEA

traps

  • testing formed stool or patients on laxatives → treating colonisation
  • metronidazole first-line for inpatients — inferior to vancomycin at all severities
  • IV vancomycin for CDI — ineffective
  • repeat testing after treatment — toxin and PCR stay positive for weeks
  • ileus with little diarrhoea can be fulminant CDI — absence of diarrhoea does not exclude it
  • fulminant CDI: surgical outcomes worsen as lactate and WBC climb — consult early, not after failure of medical therapy
  • continuing a non-essential antibiotic or PPI → higher recurrence

Key references

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